What's new in VirHostnet 2.0 (release March 2020) ?

This release include 38.642 virus-host and virus-virus manually biocurated protein-protein interactions, including more than 4.000 new interactions since the last January 2019 release.

A VirHostNet SOLR PSICQUIC webservice that provides openaccess annotations in PSI MI-TAB 2.5 format (download)

The use of UniProtkb/Swiss-Prot TrEMBL (release February 2020) and ReFSeQ (release 99 March 2020) as well as GenBank as references (March 2020)

The use of PSICQUIC webservice (March 10th 2020) to download INTACT, MINT, BIOGRID, DIP, Uniprot, MatrixDB, HPIDb, IMEx protein-protein interaction data in PSI-MITAB 2.5 format

Virus' host range annotations provided by Viralzone, Virus-Host DB, and in-house text-mining of genbank are now integrated and used to highlight biologically relevant virus/host ppi

The use of UniProtkb chain feature key - including mature peptides - to annotate protein-protein interactions at a finer scale

The use of MIscore scoring function to measure the quality of each non-redundant interaction based on independant experiments information

Network-based nodes and edges properties (degree, betweeness, ...)

A BLAST webservice to infer novel virus/host ppi from sequences based on the assumption of interology.

Follow the trend of virus/host ppi #biocuration here